PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG073370.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 389aa    MW: 42820.5 Da    PI: 7.9211
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG073370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF56.53.6e-181359349
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      i+++ +r+vtfskRr+g++K A+ LS L++++vav++ s++gk++ +
  TRIDC2AG073370.1 13 IDDDKQRSVTFSKRRAGLFKSASNLSALTGVKVAVVLESESGKMHAF 59
                      99*******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MPRREIRVGV CHIDDDKQRS VTFSKRRAGL FKSASNLSAL TGVKVAVVLE SESGKMHAFG  60
TPSVEPIIDA FLSRDPLLDP LANKAGKARI ASLQSKVARL DMENAMLEKR ANLSLKHIKK  120
MQAENPGMAA NNIFSREKDI CLEDLKRLFN DLLRVNEHIR HRMPPLHHGH APRTGGPNVQ  180
QNQLLPRGPS QDHSKTHRAS LQSTSSHHVP PQVLPPVPLP PTLQHTMEPS FHMQVPQILQ  240
SPPSPLALQL RSLMKPIPHQ VPQMFQPTPP PSTPHLASLL QPDLDQAHGL PPKPQPQLEE  300
YASPYKTTES SQNKTIPNFG GNDIAVRASL GYDNSADAPS DQVHYNEILG MDSYMGYNGS  360
DVGQYNMGRD EWVNAPPESS GGNDGDIDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-14M-type_MADS family protein