PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG073880.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 203aa    MW: 20900.2 Da    PI: 7.5916
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG073880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP28.35.9e-099516740107
               TCP  40 GfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.kaaksaa.kskksqksaasa 107
                       G+ ++sk ++WLl++a+++i++l+ ++++++ +    +a++++   +  ss  + a + + ++  +++ aas+
  TRIDC2AG073880.3  95 GLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDDllfSAHHHHHHLQPTSSMtSMAMAPPfSHATATAAAASM 167
                       7889***************************443344222222222222222122222222222223333322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
GPSQSDNNDN WSQVSTAHCP HSIRGGGRQQ GPAGGGGGLA ALVVVHGVAD RARVPRVRGQ  60
GPAQQGEDRQ GAARPPGAPL RAHGHPALRP SGPPGLSQPS KVVDWLLNAA QHEIDKLPPL  120
QFPPHDDDLL FSAHHHHHHL QPTSSMTSMA MAPPFSHATA TAAAASMMVV DSDKAAHAHD  180
GGGDLKGFMS LSNSLGLVNG TAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.14e-10TCP family protein