PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG073880.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 220aa MW: 22981.7 Da PI: 9.8255

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG073880.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	28.1	6.4e-09	86	159	40	108
TCP 40 GfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssgkaaksaa..kskksqksaasal 108 G+ ++sk ++WLl++a+++i++l+ ++++++ + +a++++ + ss +++ a+ ++ +++ aas+ TRIDC2AG073880.4 86 GLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDDllfSAHHHHHHLQPTSSMTSMAMAPpfSHATATAAAASMM 159 7889***************************4433442222222222222222222222022222222233222 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
DQCRRPWGRP PEIRTGGGRQ QGPAGGGGGL AALVVVHGVA DRARVPRVRG QGPAQQGEDR 60 QGAARPPGAP LRAHGHPALR PSGPPGLSQP SKVVDWLLNA AQHEIDKLPP LQFPPHDDDL 120 LFSAHHHHHH LQPTSSMTSM AMAPPFSHAT ATAAAASMMV VDSDKAAHAH DGGGDLKGFM 180 SLSNSLGLVN DAGAAMPTLA AAQARSYHHH YAAQGISSRW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-10	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG073880.4