PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 183aa    MW: 21348.7 Da    PI: 9.8648
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.25e-2221112290
              FAR1   2 fYneYAkevGFsvrkskskksk.rngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                       fYn+YAk+ GFs+rk+k k+ k  ++++  +++vC + gkr ++  + + ++rr r+etr++C a+l+vk++k +g+w v+ +  +HnH l+
  TRIDC2AG076920.1  21 FYNNYAKDRGFSIRKDKVKRGKgLSTTVRYSRYVCLRAGKRLSKFLNpEGRTRRLRPETRCECGAHLVVKLDKgRGVWFVAAFMDDHNHLLV 112
                       9****************99985156778889**********9998876789999***********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
AQETQLKVMG MTFASQWAYM FYNNYAKDRG FSIRKDKVKR GKGLSTTVRY SRYVCLRAGK  60
RLSKFLNPEG RTRRLRPETR CECGAHLVVK LDKGRGVWFV AAFMDDHNHL LVRPDEVVFL  120
RSHRVMGDHQ IAEILAMEGA EIRKHIIIDN FISRYGSYDK CGFLRRDVYN LCCREKNEVD  180
CEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-18FAR1 family protein