PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG080920.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 260aa    MW: 27428.9 Da    PI: 6.3882
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG080920.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.61.2e-061740123
                      EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                      ++CpdCg +F r ++L+ H+ t H
  TRIDC2AG080920.3 17 FPCPDCGDVFVRAESLHLHQATrH 40
                      89******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MVVDPAGGGT SMRAAIFPCP DCGDVFVRAE SLHLHQATRH AVSELGPEDT SRNIIEIIFQ  60
SSWLKKQSPV CAVDRILKVH NAPATLARFE AYRDAVKARA RGGRPGAGRC TADGNELLRF  120
HCAALSCSLG AGGATHLCDA ASSSCAACGI VRDGFKFRAP GVRTMATSGR AHDDAVTVGG  180
EEGEGGEGER RRAMLVCRVI AGRVKRRCEG TAEEAEASPS AEEEEYDSVA GTAGVYSSLD  240
ELEVFNPTAI LPCFVVVYKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.18e-62C2H2 family protein