PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081290.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 175aa    MW: 19954.3 Da    PI: 9.3673
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081290.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.32.6e-52131551128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvkaeek...ewyfFskrdkkyatgkrknr 76 
                       +ppGfrFhPt+eelv +yL++kv++++++l  +i+evd+y++ePwdL++              +  a+e+   ewyfFs +d+ky++g r+nr
  TRIDC2AG081290.2  13 VPPGFRFHPTEEELVGYYLARKVAAQNIDL-GIIQEVDLYRTEPWDLQEkcgggrggrgtrqvT--ADEQsssEWYFFSFKDRKYPSGMRTNR 102
                       69****************************.99**************95589999999988542..3222345******************** PP

               NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       at++g+Wkatg+dk+v+s+ +++++g++ktLvfy+grap+g+ktdW++heyrl
  TRIDC2AG081290.2 103 ATAAGFWKATGRDKPVTSSrSRSVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 155
                       *****************98566779**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MLAMDQHQEE SCVPPGFRFH PTEEELVGYY LARKVAAQNI DLGIIQEVDL YRTEPWDLQE  60
KCGGGRGGRG TRQVTADEQS SSEWYFFSFK DRKYPSGMRT NRATAAGFWK ATGRDKPVTS  120
SRSRSVIGMR KTLVFYRGRA PNGRKTDWII HEYRLQTSEH GPTQVSNSST NLLLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.12e-70NAC family protein