PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081520.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 445aa    MW: 48347.7 Da    PI: 7.1395
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081520.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA46.16.6e-15843135
              GATA  1 CsnCgttk.TplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+ TplWR+gp  ++ LCnaCG ++r +g+
  TRIDC2AG081520.5  8 CGHCGVTTgTPLWRNGPPDKPVLCNACGSRWRIRGT 43
                      9****************55555**********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MAKKEGPCGH CGVTTGTPLW RNGPPDKPVL CNACGSRWRI RGTLVNYTPA HRREDTGASE  60
ARPDKLKLKG QKQPKKRPNR SIVKDEPWSD QNFWKMGNAD TSNRSGSGSA VSYSESCAPY  120
GSVDAREMAG SAQSHAWDSL VPSRKRSCVT RPKPSPVEEL VEELNSILHE EKLYCLSAGS  180
TEEDLLYHNE TPVGSFEIGY GSVLLRHPNS KSAEEESEAN SVPADSKSYI TSESYSGSAS  240
FIAHSEIKGA SNSNAASEKL KWSPMETHDS ARRDELHYSN QHILESADSA LVSVALEDKE  300
VGGLTKSSMR SLKRPYESQP QSFTDAEVRA GTMRIASSRS GAMASSCQLR SSFLPKSGNA  360
TRASLNLFML APDKLSSMMN PSDKDSDQDS LLLEVPRNAP HPEAELLLCC PPPSQLSSVT  420
VTAASPPSNH SPGSASDQLR NRHQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.32e-53GATA family protein