PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081520.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 380aa    MW: 41862.9 Da    PI: 7.0901
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081520.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.2e-16842135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r +g+
  TRIDC2AG081520.6  8 CGHCGVTSTPLWRNGPPDKPVLCNACGSRWRIRGT 42
                      9***************55555**********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MAKKEGPCGH CGVTSTPLWR NGPPDKPVLC NACGSRWRIR GTLVNYTPAH RREDTGASEA  60
RPDKLKLKGQ KQPKKRPNRS IVKDEPWSDQ NFWKMGNADT SNRSGSGSAV SYSESCAPYG  120
SVDAREMAGS AQSHAWDSLV PSRKRSCVTR PKPSPVEELV EELNSILHEE KLYCLSAGST  180
EEDLLYHNET PVGSFEIGYG SVLLRHPNSK SAEEESEANS VPADSKSYIT SESYSGSASF  240
IAHSEIKGAS NSNAASEKLK WSPMETHDSA RRDELHYSNQ HILESADSAL VSVALEDKEV  300
GGLTKSSMRS LKRPYESQPQ SFTGQQSWFL CFCTAHTFCI FCISENVHLI FVVFAISVLG  360
LFASNMEMSC GFVLFVKMQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.33e-55GATA family protein