PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG010630.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 245aa    MW: 27352.3 Da    PI: 9.5868
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG010630.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.86e-09193242147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r++WT+  +  l+++v+++G g+Wk I    +   + R+  + k++++++
  TRIDC2BG010630.3 193 RKKWTEIQERTLIEGVAKYGRGNWKDIKIAYPdvfQDRSTVDMKDKFRNL 242
                       789********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
RIASAGALDT WANADHDKRK KLRRLVGEAT EREILGKLGQ DPSKAPQVDE AANAPSTSGA  60
NEGDRAQQDD EAHLGREKGE ANHAQEDCAR HQQEPVERTT DARVPEKPVT SAAVKGKEQA  120
TSSHVTGQAA PDHNKSHPVA GSKPSLMERK PSAIVYQWDD SGDSDSERPP HQRRLPTYER  180
KMRPPPAIPH KTRKKWTEIQ ERTLIEGVAK YGRGNWKDIK IAYPDVFQDR STVDMKDKFR  240
NLGRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11725DKRKKLRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.13e-11MYB_related family protein