PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG010780.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 255aa    MW: 28056.3 Da    PI: 5.2164
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG010780.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.90.00012469554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      + erE+  Rd +N+ f eL e+l  +     + + Ka iL+ +++ +++L
  TRIDC2BG010780.3 24 KAEREKHKRDLLNDLFGELSEMLEAD----RQTNGKACILTDTTRILRDL 69
                      579********************997....57788888998888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
AEKLVRGPVA DGKCKKKAPR MIHKAEREKH KRDLLNDLFG ELSEMLEADR QTNGKACILT  60
DTTRILRDLL SQLESLRKEN STLQNESHYV TMERNELQDE NDVLRNEILE LQNELATRPA  120
GNPGWGHATA GSPHAASTVF PSHQPMQPST IASAVFPLQQ PLQQTTILEH PYAPPPPPRE  180
LKLFPDTASD IEGLEPSEDP EAANHIARPL ARYPTESASW PVTVSLGPPR MEDEQCSSGT  240
TGSSKEGSSS ASSRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.23e-25bHLH family protein