PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG013800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 236aa    MW: 25901.4 Da    PI: 8.4927
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG013800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.9e-173178148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll+++++  G g+W++ ar+ g++Rt+k+c++rw++yl
  TRIDC2BG013800.1 31 RGPWTVEEDVLLANYIAANGEGRWNALARRAGLKRTGKSCRLRWLNYL 78
                      89********************************************97 PP
2Myb_DNA-binding52.31.3e-1684127146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +T+eE++l +++++++G++ W++Ia++++ gRt++++k++w++
  TRIDC2BG013800.1  84 RGGMTAEEQLLVLELHARWGNR-WSKIAQHLP-GRTDNEIKNYWRT 127
                       6789******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
LSVVAMAYDQ RGLRGEEAAA AAVGEEEMLR RGPWTVEEDV LLANYIAANG EGRWNALARR  60
AGLKRTGKSC RLRWLNYLRP DLRRGGMTAE EQLLVLELHA RWGNRWSKIA QHLPGRTDNE  120
IKNYWRTRVQ RHAKQLRCDV GSQRFRDLVR GLWIPRLLER IHAAANNSGD GDVIAQATAA  180
ALPVAADGRC WPVDDVFDLG PGAAADVELS CTTALSSSSS VSTDGCGVLQ PLPPPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-75MYB family protein