PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG013930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 277aa    MW: 30394.5 Da    PI: 10.1385
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG013930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.4e-10225265343
              FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                       Yn+YA ++GFs++ s+s++s  ++   k+tf+C+k+gk++ 
  TRIDC2BG013930.1 225 YNAYALKIGFSMKASTSRRSACTNVLEKQTFCCNKSGKPKI 265
                       9************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
RRLHVRPGRR RLAPDHQPRP RRHQGQRRHP HGEDDNIVHA RVHHPGGRWR RQDDCVVGRH  60
GGHARRADGA PARHVRLGVV RRDIPRNITF KMAELDLNEF PDDFDDCDGG PLYCTQVPDG  120
KMPISIEGVG ESPDLRSAPV QDVLSVEFRV AAAAAISASD ATATETVAPA PAVFSRALTL  180
PSHGGQVHTG GAGLFGFVVN EVRSSPQEPY VGMEFDTLAG AKTRYNAYAL KIGFSMKAST  240
SRRSACTNVL EKQTFCCNKS GKPKIKMMMS TPLCLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-08FAR1 family protein