PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG013930.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 186aa MW: 19706.4 Da PI: 4.9774

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG013930.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	31.7	4.9e-10	134	174	3	43
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 Yn+YA ++GFs++ s+s++s ++ k+tf+C+k+gk++ TRIDC2BG013930.2 134 YNAYALKIGFSMKASTSRRSACTNVLEKQTFCCNKSGKPKI 174 9*************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MAELDLNEFP DDFDDCDGGP LYCTQVPDGK MPISIEGVGE SPDLRSAPVQ DVLSVEFRVA 60 AAAAISASDA TATETVAPAP AVFSRALTLP SHGGQVHTGG AGLFGFVVNE VRSSPQEPYV 120 GMEFDTLAGA KTRYNAYALK IGFSMKASTS RRSACTNVLE KQTFCCNKSG KPKIKMMMST 180 PLCLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-09	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG013930.2