PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG014670.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 259aa MW: 27889 Da PI: 11.2759

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG014670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.1	1.9e-15	22	82	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ TRIDC2BG014670.1 22 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 82 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.4	8.9e-35	21	84	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC2BG014670.1 21 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 84 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
RPIVSMDGGG NSPDLQPAEP VRSRWTPKPE QILILESIFN SGMVNPPKDE TVRIRKLLER 60 FGAVGDANVF YWFQNRRSRS RRRQRQLQAQ AQAQAQAQAQ AASSTSLGLF AHGGAAYSSS 120 SSSSSWPPSP PSVGMVGDMD QCGGGDDLFA ISRQMGYADG GGGSGSSSFS AAAAQQQQLY 180 YSCQPATSKA KRGMRNGHHG VHQRSGDGGA TGPDGPALHV RARRDARPLQ RRPPPRRRLR 240 RAHAELADGR ELLPGQYSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	4e-36	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG014670.1