PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG014700.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 345aa MW: 38126.2 Da PI: 4.7847

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG014700.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.8e-53	19	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee+v++yL++kv ++++++ +vi++vd++k ePw+Lp +k +ekew+fF+++ +ky+tg+r+nratk+gyWkatgkdke++ TRIDC2BG014700.3 19 LPPGFRFHPTDEEVVTHYLTRKVLRESFSC-QVITDVDLNKNEPWELPGLAKMGEKEWFFFVHKGRKYPTGTRTNRATKKGYWKATGKDKEIF 110 79**************************.99***********8888899********************************** PP NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + lvg+kktLvfy+grap+g kt Wvmheyrle TRIDC2BG014700.3 111 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 149 984444445**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MSDVTAVMDL EVEEPQLALP PGFRFHPTDE EVVTHYLTRK VLRESFSCQV ITDVDLNKNE 60 PWELPGLAKM GEKEWFFFVH KGRKYPTGTR TNRATKKGYW KATGKDKEIF RGKGRDAVLV 120 GMKKTLVFYT GRAPSGGKTP WVMHEYRLEG ELPHRLPRTA KDDWAVCRVF NKDLAARNAP 180 QMAPAADGGM EDPLAFLDDL LIDTDLFDDA DLPMLMDSPS GADDFAGASS STCSAALPLE 240 PDAELPVLHP QQQQSPNYFF MPATANGNLG GAEYSPYQAM GDQQAAIRRY CKPKAEVASS 300 SALLSPSLGL DTAALAGAET SFLMPSSRSY LDLEELFRGE PLMDY

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MSDVTAVMDL EVEEPQLALP PGFRFHPTDE EVVTHYLTRK VLRESFSCQV ITDVDLNKNE  60
PWELPGLAKM GEKEWFFFVH KGRKYPTGTR TNRATKKGYW KATGKDKEIF RGKGRDAVLV  120
GMKKTLVFYT GRAPSGGKTP WVMHEYRLEG ELPHRLPRTA KDDWAVCRVF NKDLAARNAP  180
QMAPAADGGM EDPLAFLDDL LIDTDLFDDA DLPMLMDSPS GADDFAGASS STCSAALPLE  240
PDAELPVLHP QQQQSPNYFF MPATANGNLG GAEYSPYQAM GDQQAAIRRY CKPKAEVASS  300
SALLSPSLGL DTAALAGAET SFLMPSSRSY LDLEELFRGE PLMDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-80	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG014700.3