PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG014870.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 226aa    MW: 23252.7 Da    PI: 5.2309
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG014870.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.7e-08134154526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                       +C ++ar G+Ck G+ C+F Hg
  TRIDC2BG014870.7 134 PCLYYAR-GYCKNGSACRFVHG 154
                       8******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
SSPSSWAPPP VFSRSNSVSN GAAEEMAGVG EEQLMSPANG GGGPQSPFFG GDSSLILDEL  60
HLQDQLAFLS EGGMGGGGGR QLPLFDSGEC RSPSGDGGLF PYGAGWANGG PGHRRSASVS  120
ELCFGGSDGL GWKPCLYYAR GYCKNGSACR FVHGGLPDDL AGAKMDQAAV EQQCQDFLLR  180
SKSQRLAAAA GFAYSPTGSL PGSPSAASKC LSLLLKQQQQ QNEGQR