PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG015370.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 851aa MW: 94173.7 Da PI: 6.5647

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG015370.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	264	363	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ ++++e++ lt++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + TRIDC2BG015370.3 264 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGRPLTIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIE-PG 354 99************************555567778***********99899999999.*******************887.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2BG015370.3 355 GKLVMGFRK 363 777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MKNPGAHPVS CQVAPKLFLP PQNNQRLFGK SDELLPGRPL ESPSLMIDSR NDDIAIIAKS 60 NHPFMVKNLE IGQSSNNLRQ KEIENGARQI KWEQPTLSIG DMGRMPFLIR PQSALESPRS 120 QCTRRDDNRD PTADSTTSES ISEAGLSMSL GIANNGNKME ATSTMERPMV SPTTPFSEGR 180 ELATTLSPFQ HAQRARHFLT RPSRVAEGAA FDPMRDGFPH LRVARPPAEG RGRNQLLPRY 240 WPRITDQELQ QISGDSNSTI VPLFEKVLSA SDAGRIGRLV LPKACAEAYF PPISQPEGRP 300 LTIQDAKGKE WHFQFRFWPN NNSRMYVLEG VTPCIQSLQL QAGDTVTFSR IEPGGKLVMG 360 FRKATNTVSL PDSQISAIAT GSLLGDSFFS NTNENLSIVS GYSGFLQSMK GAADLQPSSL 420 FDHHANSADG EVSWLKADRF GGRPDEGSFQ FLHKKSRNIG SKSRRLLMDN EEALELKLSW 480 EEAQELLRPA PSAKPTVVMI EDYEFEEYDE PPVFAKRSIF TSRSTGEQDQ WIQCDDCSKW 540 RRLPLNVIIA SKWRCADNTW DPKSCSCSAP EELAHKELQS ILQQYEEIRR RKSNYFLKQS 600 IPEMDASSLD ALATAAVFGE VGNQGAASVA TTTKHPRHRP GCTCIVCIQP PSGKGPKHNP 660 ACTCNVCMTV RRRFKTLMMR KKQRQSEREE AEASKRISWV GRDEPEGSNL SRSPQTVDTM 720 RDGDVIMFDK ADASKGHIDL NFHPASREEE QQHGGQPRVS MVSLLEVANR PLESYMKQNG 780 LVSLAAEQGS SSGTATVPSQ PAPMESEERP SDEGRAVPVE QEREPTDNMA VDEAAGENQG 840 HAASASDIAA A

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MKNPGAHPVS CQVAPKLFLP PQNNQRLFGK SDELLPGRPL ESPSLMIDSR NDDIAIIAKS  60
NHPFMVKNLE IGQSSNNLRQ KEIENGARQI KWEQPTLSIG DMGRMPFLIR PQSALESPRS  120
QCTRRDDNRD PTADSTTSES ISEAGLSMSL GIANNGNKME ATSTMERPMV SPTTPFSEGR  180
ELATTLSPFQ HAQRARHFLT RPSRVAEGAA FDPMRDGFPH LRVARPPAEG RGRNQLLPRY  240
WPRITDQELQ QISGDSNSTI VPLFEKVLSA SDAGRIGRLV LPKACAEAYF PPISQPEGRP  300
LTIQDAKGKE WHFQFRFWPN NNSRMYVLEG VTPCIQSLQL QAGDTVTFSR IEPGGKLVMG  360
FRKATNTVSL PDSQISAIAT GSLLGDSFFS NTNENLSIVS GYSGFLQSMK GAADLQPSSL  420
FDHHANSADG EVSWLKADRF GGRPDEGSFQ FLHKKSRNIG SKSRRLLMDN EEALELKLSW  480
EEAQELLRPA PSAKPTVVMI EDYEFEEYDE PPVFAKRSIF TSRSTGEQDQ WIQCDDCSKW  540
RRLPLNVIIA SKWRCADNTW DPKSCSCSAP EELAHKELQS ILQQYEEIRR RKSNYFLKQS  600
IPEMDASSLD ALATAAVFGE VGNQGAASVA TTTKHPRHRP GCTCIVCIQP PSGKGPKHNP  660
ACTCNVCMTV RRRFKTLMMR KKQRQSEREE AEASKRISWV GRDEPEGSNL SRSPQTVDTM  720
RDGDVIMFDK ADASKGHIDL NFHPASREEE QQHGGQPRVS MVSLLEVANR PLESYMKQNG  780
LVSLAAEQGS SSGTATVPSQ PAPMESEERP SDEGRAVPVE QEREPTDNMA VDEAAGENQG  840
HAASASDIAA A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	671	682	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-179	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG015370.3