PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG015390.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 239aa    MW: 26864.2 Da    PI: 4.8972
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG015390.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.61.5e-11152231190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+ F +r  ks+ + + +    ++ vC ++gk++ e+++         +  ++C a +++ + +d+ w++t+ +  HnH+++
  TRIDC2BG015390.3 152 DFYNLYSWEICFGIRYGKSRLNAERT-KSIQEIVCGCSGKPDAENSR---------SCMCECPALIRLLRASDNSWYITEHRASHNHSMS 231
                       6*****************99995544.67789********9997665.........899****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDIEGMEFLL DAVDRFPVWE EFADNLDHID PVPLMYLLDN GAANQDIRQG DVDSGITEMV  60
CDGVLTDAQV GGQRRRDESP TRSAQSTGRV NPQAPGWTKR LRLGSVPPDR VPCPSRMSAL  120
ELSMRKYAEQ PDKNVVRPEL GLSFDSLGEA YDFYNLYSWE ICFGIRYGKS RLNAERTKSI  180
QEIVCGCSGK PDAENSRSCM CECPALIRLL RASDNSWYIT EHRASHNHSM SLTMGEKVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.18e-10FAR1 family protein