PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG016110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 147aa    MW: 16812.6 Da    PI: 7.719
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG016110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.5e-2056104355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+G+r+++ +g+W+AeIrdp +    +r++lg+f t+e+Aa+a+++a+++++g
  TRIDC2BG016110.2  56 YRGIRRRP-WGKWAAEIRDPAK---GARVWLGTFATPEGAARAYDRAARRIRG 104
                       9*******.**********843...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
ISDFTPERDH RGGSKRGLCT ADFWPHAAAF DDPTDHHDFY PDEEEPSRKR ERKTMYRGIR  60
RRPWGKWAAE IRDPAKGARV WLGTFATPEG AARAYDRAAR RIRGTKAKVN FPNEDPPLDL  120
DDYDVANGGY NVAGFFHQPP YMAEATF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14863RKRERKTMYRGIRRRP
24964RKRERKTMYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.19e-25ERF family protein