PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG016730.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 667aa    MW: 78292.6 Da    PI: 7.2968
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG016730.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.72.5e-2525119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       kfYn+YA e GFsvrk + +  + n++i+ +++vCs+eg ree++ k   ++++r++r+ tr+gCkak+++ +   +g+w v+++  eHnH+l
  TRIDC2BG016730.3  25 KFYNKYALEKGFSVRKGYVEWDEANEKIILKKLVCSREGCREEKHMKrkrEDRKRKPRNITRVGCKAKFVIARVAkTGRWFVKDFIDEHNHPL 117
                       6*****************************************99988777889999***************99988****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC2BG016730.3 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 667 aa     Download sequence    
VSAECMAEYD DVVSRMFDSE EEGFKFYNKY ALEKGFSVRK GYVEWDEANE KIILKKLVCS  60
REGCREEKHM KRKREDRKRK PRNITRVGCK AKFVIARVAK TGRWFVKDFI DEHNHPLAPR  120
DLACFLRSHR RISDEQKADI IEMESVGIRK HKIMDVLCMQ YGGYDHVGCM TRDIYNFCHR  180
YKQETVAAGD AQTVIRHMMA RQERDPDYFF KYLVDKDGHL KGLFWSDTQS RLDYEAFGDV  240
VVFDSTYRTN KYNLPFVPFV GLNHHRNTVI FGCEIISHET NEAYEWMLRT FSEAMSQKHS  300
ISVITDGDLA MQRAVRVVWP DSYHRLCVWH IQQNIVRHLH DDEVREEFRS FIYDSSSTVE  360
HERKWIEFLR RNEVTSEESW LHQMYQMRKL WCAPYLVGRC FLGLSSNQRS ESLNSVLHTH  420
LEGKMTLFDM LEHYERCLSG RRLNEAILDI VALQSVPFTD ADASSLEKHA ARVFTPCMFQ  480
LVRWSINAVS KCVISEILDA WELTTYVVAK IDRREKKFEV RCEMNEGSLY MISCSCRKLE  540
CLGTPCSHIF YILGIRQVEL LPRCCVPMRW TMSAKSAFPP IRKSEMYDYS ASLVRYRELR  600
NLSHAACFRA CQSSEEYQRL EMVLSEQDGN KESSRGQEEC IRFGPVLPQT TEIDCGDLEK  660
VLDPVHV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17380KREDRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-93FAR1 family protein