PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG017720.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 183aa    MW: 19481.4 Da    PI: 9.4341
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG017720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11249454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      +h ++Er+RR+++N+ +  Lr l P     + k+ + a+i   A+e+I++L
  TRIDC2BG017720.1  2 SHIAVERNRRRQMNDHLKVLRALTPAF---YIKRCDQASIIGGAIEFIREL 49
                      89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSHIAVERNR RRQMNDHLKV LRALTPAFYI KRCDQASIIG GAIEFIRELH TVLDALEAKK  60
KRRLCSPTPS PRSLLTCSTP TSAGGSASDV SPNSNGSSGG SYAITPVGAA VKELAACCNS  120
PAADVEARIS GANVLLRTLS GRIPGQAARI VALLESLHLE VLHVNISTMD DTVLHSFVLK  180
SLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKKRR
25964KKKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-53bHLH family protein