PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018090.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 589aa MW: 65208.7 Da PI: 8.8895

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.4	6.8e-14	152	188	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +C+Ck+skClkkYCeCfa+g++C++ C+C++C N+ TRIDC2BG018090.1 152 RTQCKCKNSKCLKKYCECFASGRYCND-CNCKNCYNNV 188 679**********************.******96 PP
2	TCR	48.9	1.3e-15	236	276	1	41
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k++kgC+Ck+s+ClkkYCeCf ++ Cse+CkC dCkN e+ TRIDC2BG018090.1 236 KHMKGCHCKRSECLKKYCECFRSNILCSENCKCMDCKNYES 276 589***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MDNPLNLPPG SVQPNFCSAF YARKSGSAAT AASLSQALPL WPPVPWPTLM VRKHHMPFPT 60 QPAAKKLQVR RLSPVLSQDL PLREALQVAE LPPPRVELRP LQQAPPVLKQ SLPKTEVPVV 120 LPMRATSVDV RWNARYPWSE TSCESTDRTS RRTQCKCKNS KCLKKYCECF ASGRYCNDCN 180 CKNCYNNVGH EAARQVAIDA AMERNPMAFM PKIGNIPPHA AQNREFKVAE GPLVGKHMKG 240 CHCKRSECLK KYCECFRSNI LCSENCKCMD CKNYESNEDR KAIRRITRHQ QHLVYAHHMQ 300 NPATMGITGP YAALSPAAEK LSNLSVASSG RDQLINNNDS SQVTSSLLTP VPIEGTKSAV 360 KVEPHGVTYR PLLADVIQIE NVNELCKVLL LVSRQAAGAS VGVKENTNRR KLDQADSCLS 420 SINHDMEAVE KQRDEQVCST ENSLTAVPVS EVRAGAARSD PSDTCKYDRR PVSPETQKLM 480 CNEQDRLFLT PSVAAVIPSA TKQRLPDTYK EQEKRILKTL HDYLGELVNC GRLHEEKLSS 540 MPSKFFHEQT SVGSSCGSSS VSRVAEVARV GQTIRQSLHS PASVKSPGL

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MDNPLNLPPG SVQPNFCSAF YARKSGSAAT AASLSQALPL WPPVPWPTLM VRKHHMPFPT  60
QPAAKKLQVR RLSPVLSQDL PLREALQVAE LPPPRVELRP LQQAPPVLKQ SLPKTEVPVV  120
LPMRATSVDV RWNARYPWSE TSCESTDRTS RRTQCKCKNS KCLKKYCECF ASGRYCNDCN  180
CKNCYNNVGH EAARQVAIDA AMERNPMAFM PKIGNIPPHA AQNREFKVAE GPLVGKHMKG  240
CHCKRSECLK KYCECFRSNI LCSENCKCMD CKNYESNEDR KAIRRITRHQ QHLVYAHHMQ  300
NPATMGITGP YAALSPAAEK LSNLSVASSG RDQLINNNDS SQVTSSLLTP VPIEGTKSAV  360
KVEPHGVTYR PLLADVIQIE NVNELCKVLL LVSRQAAGAS VGVKENTNRR KLDQADSCLS  420
SINHDMEAVE KQRDEQVCST ENSLTAVPVS EVRAGAARSD PSDTCKYDRR PVSPETQKLM  480
CNEQDRLFLT PSVAAVIPSA TKQRLPDTYK EQEKRILKTL HDYLGELVNC GRLHEEKLSS  540
MPSKFFHEQT SVGSSCGSSS VSRVAEVARV GQTIRQSLHS PASVKSPGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-72	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018090.1