PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018090.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 373aa MW: 41874.4 Da PI: 9.0967

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018090.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.2	3.8e-14	113	149	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + +C+Ck+skClkkYCeCfa+g++C++ C+C++C N+ TRIDC2BG018090.11 113 RTQCKCKNSKCLKKYCECFASGRYCND-CNCKNCYNNV 149 679**********************.******96 PP
2	TCR	49.7	7.2e-16	197	237	1	41
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k++kgC+Ck+s+ClkkYCeCf ++ Cse+CkC dCkN e+ TRIDC2BG018090.11 197 KHMKGCHCKRSECLKKYCECFRSNILCSENCKCMDCKNYES 237 589***********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
LWPPVPWPTL MVRKHHMPFP TQPAAKKLQV RRLSPVLSQD LPLREALQVA ELPPPRVELR 60 PLQQAPPVLK QSLPKTEVPV VLPMRATSVD VRWNARYPWS ETSCESTDRT SRRTQCKCKN 120 SKCLKKYCEC FASGRYCNDC NCKNCYNNVG HEAARQVAID AAMERNPMAF MPKIGNIPPH 180 AAQNREFKVA EGPLVGKHMK GCHCKRSECL KKYCECFRSN ILCSENCKCM DCKNYESNED 240 RKAIRRITRH QQHLVYAHHM QNPATMGITG PYAALSPAAE KLSNLSVASS GRDQLINNND 300 SSQVTSSLLT PVPIEGTKSA VKVEPHGVTY RPLLADVIQI ENVNELCKVL LLVSRQAAGA 360 SVEVLRRTLT EEN

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

LWPPVPWPTL MVRKHHMPFP TQPAAKKLQV RRLSPVLSQD LPLREALQVA ELPPPRVELR  60
PLQQAPPVLK QSLPKTEVPV VLPMRATSVD VRWNARYPWS ETSCESTDRT SRRTQCKCKN  120
SKCLKKYCEC FASGRYCNDC NCKNCYNNVG HEAARQVAID AAMERNPMAF MPKIGNIPPH  180
AAQNREFKVA EGPLVGKHMK GCHCKRSECL KKYCECFRSN ILCSENCKCM DCKNYESNED  240
RKAIRRITRH QQHLVYAHHM QNPATMGITG PYAALSPAAE KLSNLSVASS GRDQLINNND  300
SSQVTSSLLT PVPIEGTKSA VKVEPHGVTY RPLLADVIQI ENVNELCKVL LLVSRQAAGA  360
SVEVLRRTLT EEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	3e-61	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018090.11