PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018540.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 468aa MW: 53454.2 Da PI: 9.5476

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018540.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45.7	1.1e-14	45	96	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR kek+ TRIDC2BG018540.10 45 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKEKR 96 66899**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
LRLHRRLRSS SSGLRCLRPV RGLWQLGFQM MAKGFLAKSD NAGTKKSPLQ IQMLESFYSE 60 VQYPKPEDVT EYAASVGLTY NQVRIWFKER RRKEKRHMEA AEVHMETQAS ARSNWPRCSS 120 SRSSNSSQSP TQDTTGHHSY QDQSVLKKRK IMSPTAQRST LPFENNDPVR KHGKGKGLMT 180 VWHAMYSQTA EIQDCSSFID ESGCLRSLRP FEDCGRKLAQ VQRQTSPQKK VNKKSRPPPS 240 KRKVPCGRVT DLTEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS 300 AHISSTGRHG CPLCKDLLAR FPPPSVRMKQ LFPTKPWESS PEMVKKLFQV VRFVYTHFGS 360 LDVHPFTFDE FAQAFHDKVQ ILLNLPEFGI ICCIIFLLCK CDLQDSSLLG KVHVSLLKLL 420 MLNTERGSGS VFVPRSSKDS RFLSFLNFVR EQEFDVNFWI KSLNSLTW

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

LRLHRRLRSS SSGLRCLRPV RGLWQLGFQM MAKGFLAKSD NAGTKKSPLQ IQMLESFYSE  60
VQYPKPEDVT EYAASVGLTY NQVRIWFKER RRKEKRHMEA AEVHMETQAS ARSNWPRCSS  120
SRSSNSSQSP TQDTTGHHSY QDQSVLKKRK IMSPTAQRST LPFENNDPVR KHGKGKGLMT  180
VWHAMYSQTA EIQDCSSFID ESGCLRSLRP FEDCGRKLAQ VQRQTSPQKK VNKKSRPPPS  240
KRKVPCGRVT DLTEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS  300
AHISSTGRHG CPLCKDLLAR FPPPSVRMKQ LFPTKPWESS PEMVKKLFQV VRFVYTHFGS  360
LDVHPFTFDE FAQAFHDKVQ ILLNLPEFGI ICCIIFLLCK CDLQDSSLLG KVHVSLLKLL  420
MLNTERGSGS VFVPRSSKDS RFLSFLNFVR EQEFDVNFWI KSLNSLTW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	95	RRRKEK
2	147	176	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	2e-41	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018540.10