PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG022240.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 212aa    MW: 23832.2 Da    PI: 9.7319
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG022240.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.21.8e-35481402103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+ +++++sw e+  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll
  TRIDC2BG022240.3  48 FLTKTYQLVDDPCTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLL 131
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i+r+ks+
  TRIDC2BG022240.3 132 AEIHRRKSS 140
                       ******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
VYVRVVEKAM AFLVERCGEM VVSMEMGSGA PGAHGGGGIA GKPVPAPFLT KTYQLVDDPC  60
TDHIVSWGED DATFVVWRPP EFARDLLPNY FKHNNFSSFV RQLNTYGFRK IVADRWEFAN  120
EFFRKGAKHL LAEIHRRKSS QPPPPSMVPH QAAYHHHYHL GNTFSPPPPP PQPLRPRRTV  180
EATAAATSWR PCRRTTASCG GTTRCCCRSW RT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-62HSF family protein