PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG022240.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 320aa    MW: 35296.6 Da    PI: 7.2359
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG022240.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.94.3e-35391312103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+ +++++sw e+  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg k+ll
  TRIDC2BG022240.4  39 FLTKTYQLVDDPCTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEFANEFFRKGAKHLL 122
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                        +i+r+ks+
  TRIDC2BG022240.4 123 AEIHRRKSS 131
                       ******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MAFLVERCGE MVVSMEMGSG APGAHGGGGI AGKPVPAPFL TKTYQLVDDP CTDHIVSWGE  60
DDATFVVWRP PEFARDLLPN YFKHNNFSSF VRQLNTYGFR KIVADRWEFA NEFFRKGAKH  120
LLAEIHRRKS SQPPPPSMVP HQAAYHHHYH LGNTFSPPPP PPPAAHHHHH HPVYQHFHEE  180
PAAAAASHGG GNGGGDFLAA LSEDNRQLRR HNSLLLSELA HMKKLYNDII YFLQNHVAPV  240
TSPSSAASQR HLPLPGAGAG VAASNSCRLL ELDMDVDRNS PAAEEDDTVK LFGVALHHGK  300
KKRAHREERG DVVHDLGSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-77HSF family protein