PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG023020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 176aa    MW: 18535.5 Da    PI: 7.8885
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG023020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.7e-105302047
                      TTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqky 47
                      G++ W+ Ia++++ gRt++++k++w+++
  TRIDC2BG023020.1  5 GNK-WSQIAAHLP-GRTDNEVKNFWNSF 30
                      788.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
HSIRGNKWSQ IAAHLPGRTD NEVKNFWNSF IKKKLRQRGI DPATHEHKPL DPAAPAAPAT  60
PVSRNAVFSE NELILSSPVG GPHMPPLVSA ESYVYSRGST DGAGGAHAAV GGCSDDGSLS  120
SLSGYNNNQT ADFAGYLDAD ALHGGVIPSA VAELEHKHNP RGDHWLKGSK LMGGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.34e-20MYB family protein