PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 728aa MW: 78999.5 Da PI: 4.6494

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	5	44	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed+ l ++ +G+++W+ Ia + +t+ qc+ rw++yl TRIDC2BG023880.13 5 EDDVLRAQIAHHGTDNWTVIATQFK-DKTARQCRRRWYNYL 44 9999******************9.************7 PP
2	Myb_DNA-binding	41.2	3.9e-13	50	93	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.13 50 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 93 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
GAPREDDVLR AQIAHHGTDN WTVIATQFKD KTARQCRRRW YNYLNTECKK GGWSREEDML 60 LCEAQKLLGN KWTEIAKVVS GRTDNAVKNR FSTLCKRRAK DDELLEENGT VCSNASAKRV 120 LTQSGGVTCA APGSSPPIKN MSSCKPDFKE NLAPNMRSFG QQKSIRQDSR QPLASICPDN 180 QSVNIVKTQS LVTKTSTKQL HGEEQSCVKH DGNFLKRNDP KLATLLQQAD LLSSLATKVN 240 TENTSQSMDE AWQKLQHHLV KKDDNDMSES SMSGTASLLD DLDDLIVDPY ENEEEDEQKS 300 REQNGATSQV APDQIMDNCP VDQIAEESSL CGNTLSSTME PCPVAEILAH INLGEAAEDM 360 GLHFMEYSSP THAAQAQQAK ADAEIPASVD LSESAEGSWS QFMEYTSPAH TVLHANSSPA 420 HTVQAQQAKA DAEIPVSVDL SEAAEGSWSQ FMEYTSPAHT VLHAEGDAET PASVKLSEAA 480 EGSLPQCMEH MSPAHTLLRA KTDSEIPASA NSNEAAEGSW SQFMEYMSPA HIVLHAKADA 540 ETPASVNLGE AAEGSLPQCM EPMSPAHTLL RAKTDYEIPA SANLSEAAKD DSLQCTEYTS 600 PARADLQANA DAEISEDFSE VAQDSRLQCA KFTSPAHTAI KGKAVAKKGT SENCSDVPED 660 SSTQPCMEFT SPAHTVPTFH PFTDNVPTPK ITASERNFLL SVLELASPGS KPETSQQPSC 720 KRALLNSL

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

GAPREDDVLR AQIAHHGTDN WTVIATQFKD KTARQCRRRW YNYLNTECKK GGWSREEDML  60
LCEAQKLLGN KWTEIAKVVS GRTDNAVKNR FSTLCKRRAK DDELLEENGT VCSNASAKRV  120
LTQSGGVTCA APGSSPPIKN MSSCKPDFKE NLAPNMRSFG QQKSIRQDSR QPLASICPDN  180
QSVNIVKTQS LVTKTSTKQL HGEEQSCVKH DGNFLKRNDP KLATLLQQAD LLSSLATKVN  240
TENTSQSMDE AWQKLQHHLV KKDDNDMSES SMSGTASLLD DLDDLIVDPY ENEEEDEQKS  300
REQNGATSQV APDQIMDNCP VDQIAEESSL CGNTLSSTME PCPVAEILAH INLGEAAEDM  360
GLHFMEYSSP THAAQAQQAK ADAEIPASVD LSESAEGSWS QFMEYTSPAH TVLHANSSPA  420
HTVQAQQAKA DAEIPVSVDL SEAAEGSWSQ FMEYTSPAHT VLHAEGDAET PASVKLSEAA  480
EGSLPQCMEH MSPAHTLLRA KTDSEIPASA NSNEAAEGSW SQFMEYMSPA HIVLHAKADA  540
ETPASVNLGE AAEGSLPQCM EPMSPAHTLL RAKTDYEIPA SANLSEAAKD DSLQCTEYTS  600
PARADLQANA DAEISEDFSE VAQDSRLQCA KFTSPAHTAI KGKAVAKKGT SENCSDVPED  660
SSTQPCMEFT SPAHTVPTFH PFTDNVPTPK ITASERNFLL SVLELASPGS KPETSQQPSC  720
KRALLNSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	3e-65	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.13