PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG026060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 193aa    MW: 20222.6 Da    PI: 5.2552
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG026060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB183.91.3e-5720115297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       +eqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedy+eplk+yl+k+rele
  TRIDC2BG026060.3  20 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELE 112
                       79******************************************************************************************* PP

             NF-YB  95 gek 97 
                       gek
  TRIDC2BG026060.3 113 GEK 115
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MPDSDNDSGG PSNADFSSPK EQDRFLPIAN VSRIMKKALP ANAKISKDAK ETVQECVSEF  60
ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYMEP LKLYLHKFRE LEGEKAVSAG  120
GVGALPSPGG EAGGYGGMYG GAGAGGGGGG MFMMMGQPMY GSPPAAGYQH PQHHHQMMTG  180
GQGGYGYGDA GAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-74NF-YB family protein