PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG026190.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 150aa    MW: 16564.1 Da    PI: 12.1757
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG026190.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA972.1e-30154458
         CBFB_NFYA  4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      ++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  TRIDC2BG026190.6  1 MFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 54
                      69*************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA RKPYLHESRH RHAMKRARGT GGRFLNTKQL  60
EEQKQKQASG GASCTKVLGK NTLLQSSSAF APSASAPSNM SSFSTTGMLA NQERTCFPSV  120
GFRPTVSFSA LNGNGKLAPN GMHQRASMMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13948RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-32NF-YA family protein