PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG026190.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 254aa    MW: 27978.3 Da    PI: 9.9231
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG026190.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.73.3e-32148204158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+Rg+gGrF
  TRIDC2BG026190.9 148 EEPMFVNAKQYHAILRRRQIRAKLEAQNKL-VKARKPYLHESRHRHAMKRARGTGGRF 204
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEDHPGHPIS NYDFLSGNGC HTKKLVHKNY DRNSSSAKSG RSQQEASATS DCSLNEQHTS  60
RPPSQSDNDN DHGKPDQHMV KPLLSLGNPE TVAPPPMLDC SQSFAYIPYT ADAYAGIFPG  120
YASHAIVHPQ LNAATNSRVP LPVEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA  180
RKPYLHESRH RHAMKRARGT GGRFLNTKQL EEQKQKQASG GASCTKERTC FPSVGFRPTV  240
SFSALNGNGK LAPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189198RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-34NF-YA family protein