PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG027210.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 463aa MW: 49240.5 Da PI: 6.2939

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG027210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	1e-05	107	127	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk Fs++ +L H+++H TRIDC2BG027210.2 107 CRECGKLFSSWRSLFGHMKSH 127 ********************9 PP
2	zf-C2H2	15.1	6.9e-05	308	330	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp Cg++Fs+ L H +H TRIDC2BG027210.2 308 YECPGCGRVFSSYQALGGHRASH 330 99***********9999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDAVGELAAA GMHHHHHHHH RCKVCGKGFS CGRSLGGHMR SHISLGEALP EADDELMRRS 60 SANGGRTSAN GAVGYGLREN PKKTRRLSDF ADEEEDQGGD GGEQRACREC GKLFSSWRSL 120 FGHMKSHAPG AARDHDEYDE ADDDVDLLGE EEYSFAAEAE AEAEKEEEEE MEAAPMEPLV 180 PAPVAVMAAP PRRRRRSMRV AAPAPAPPPP MLSAFEKEQE DVALCLLMLS RDSTGGMRGS 240 PAPKQAHLPR NGYGYNSDDD SALFQYGDAK TKSVAKSKKR RTSHYALNSA SPKQRGEAAP 300 PPAKRTRYEC PGCGRVFSSY QALGGHRASH KRINTSCSAP KAAPAAAPAP EPSVDTYTSF 360 GTLSPSASPD SVAIGIGAGS NKKPAAAEAE KFECPVCFRV FGSGQALGGH KRSHIIADTA 420 FSSDGELYGS ASVSVNEEQE QGYPVAAAGS LDLNFPPAPS EEA

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDAVGELAAA GMHHHHHHHH RCKVCGKGFS CGRSLGGHMR SHISLGEALP EADDELMRRS  60
SANGGRTSAN GAVGYGLREN PKKTRRLSDF ADEEEDQGGD GGEQRACREC GKLFSSWRSL  120
FGHMKSHAPG AARDHDEYDE ADDDVDLLGE EEYSFAAEAE AEAEKEEEEE MEAAPMEPLV  180
PAPVAVMAAP PRRRRRSMRV AAPAPAPPPP MLSAFEKEQE DVALCLLMLS RDSTGGMRGS  240
PAPKQAHLPR NGYGYNSDDD SALFQYGDAK TKSVAKSKKR RTSHYALNSA SPKQRGEAAP  300
PPAKRTRYEC PGCGRVFSSY QALGGHRASH KRINTSCSAP KAAPAAAPAP EPSVDTYTSF  360
GTLSPSASPD SVAIGIGAGS NKKPAAAEAE KFECPVCFRV FGSGQALGGH KRSHIIADTA  420
FSSDGELYGS ASVSVNEEQE QGYPVAAAGS LDLNFPPAPS EEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	4e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG027210.2