PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG027210.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 393aa    MW: 42772.6 Da    PI: 7.7164
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG027210.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2188.2e-0698118323
                       ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                       C  Cgk Fs++ +L  H+++H
  TRIDC2BG027210.3  98 CRECGKLFSSWRSLFGHMKSH 118
                       ********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
AGMHHHHHHH HRCKVCGKGF SCGRSLGGHM RSHISLGEAL PEADDELMRR SSANGGRTSA  60
NGAVGYGLRE NPKKTRRLSD FADEEEDQGG DGGEQRACRE CGKLFSSWRS LFGHMKSHAP  120
GAARDHDEYD EADDDVDLEE EMEAAPMEPL VPAPVAVMAA PPRRRRRSMR VAAPAPAPPP  180
PMLSAFEKEQ EDVALCLLML SRDSTGGMRG SPAPKQAHLP RNERGQEQEA KDQPLRSQLR  240
LAEATGRGGA ATGEAHPLRV PRVRQGVQLL PGAGRPPREP QADQHQLQRA QGRARRRPRA  300
GAERRHLHLV RHPVPVGLAG LGGHRHWRRQ QQEASCCRGG ERSHIIADTA FSSDGELYGS  360
ASVSVNEEQE QGYPVAAAGS LDLNFPPAPS EEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.15e-18C2H2 family protein