PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG027210.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 292aa    MW: 30839.4 Da    PI: 7.5306
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG027210.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-05167189123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+Cp Cg++Fs+   L  H  +H
  TRIDC2BG027210.4 167 YECPGCGRVFSSYQALGGHRASH 189
                       99***********9999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MKSHAPGAAR DHDEYDEADD DVDLEEEEEM EAAPMEPLVP APVAVMAAPP RRRRRSMRVA  60
APAPAPPPPM LSAFEKEQED VALCLLMLSR DSTGGMRGSP APKQAHLPRN GYGYNSDDDS  120
ALFQYGDAKT KSVAKSKKRR TSHYALNSAS PKQRGEAAPP PAKRTRYECP GCGRVFSSYQ  180
ALGGHRASHK RINTSCSAPK AAPAAAPAPE PSVDTYTSFG TLSPSASPDS VAIGIGAGSN  240
KKPAAAEAEK FECPVCFRVF GSGQALGGHK RSHIIADTAF SSDGELYGSA SV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.18e-19C2H2 family protein