PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG027210.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 227aa MW: 24698.7 Da PI: 7.3892

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG027210.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.9	4e-06	186	206	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk Fs++ +L H+++H TRIDC2BG027210.5 186 CRECGKLFSSWRSLFGHMKSH 206 ********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
LRSITTSASF AFRLTTPPYL SSPLLLQLSQ ASFALPQIPN GRARRLRSSP RRPLPIPTLL 60 LIDPIDIDIA ASCSVGRSIM DAVGELAAAG MHHHHHHHHR CKVCGKGFSC GRSLGGHMRS 120 HISLGEALPE ADDELMRRSS ANGGRTSANG AVGYGLRENP KKTRRLSDFA DEEEDQGGDG 180 GEQRACRECG KLFSSWRSLF GHMKSHAPGA ARDHDEYDEA DDDVDLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	9e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG027210.5