PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG028860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 554aa    MW: 61327.3 Da    PI: 6.3716
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG028860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS437.41.1e-1331845531373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l+elLl+cA+av+++++ +++ ++ +l++++s +g+p++Rl ay++e+L arla+s++++ykal+++e +   ss+ l+++++++e++P++kf
  TRIDC2BG028860.1 184 LKELLLACARAVEEKNMYAVDVMVPELRKMVSVSGTPLERLGAYMVEGLVARLASSGHSIYKALRCKEPK---SSDLLSYMHFLYEACPYFKF 273
                       5799*****************************************************************9...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav+ge+r+HiiDf i qG+QW++LlqaLa+Rp+gpp++RiTg++++ s   +   l  +g+rL+++A  ++vpfef+  va 
  TRIDC2BG028860.1 274 GYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGLDDSVSAyaRGGGLDLVGRRLSHIAGLCKVPFEFHS-VAM 365
                       ********************************************************888899999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       + e++e  +L v pgEalaVn+ l+lh+++de+vs++++rd++L+lvksl+Pkv+++veqe+++n+++F +rf+e+leyy+a+f+s++ +lpr
  TRIDC2BG028860.1 366 AGEEVEEGHLGVIPGEALAVNFTLELHHIPDETVSTANHRDRILRLVKSLRPKVLTLVEQESNTNTAPFPQRFAETLEYYTAIFESIDLTLPR 458
                       9******************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +++er+++E+++l+re+vn++acegaer+erhe ++kW++rl++aGF+p pls+ +++++++ll+ ++++ y++ e++g+l+lgWk++pLv+ 
  TRIDC2BG028860.1 459 DDKERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLTMAGFRPSPLSSLVNATISTLLQSYSEN-YKLAERDGALYLGWKNKPLVVS 550
                       ********************************************************************55.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC2BG028860.1 551 SAW 553
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MADTPTSRMI HPFSNMQGQN PKQFQFQYSD NPQHPCRPYQ PSPDTHVVPQ HHYSLKSHSS  60
DASYENQVAQ MKHTLDSSAA DGYMRHDSPS SHSFTPPSIR SGSGSPSSHD DSHSDSTNGS  120
PVSASCVTVT EDPNDLKQKL KDLEAEMLGP DAEIVNSLES SVAKQLSLEP EKWAQMMDFP  180
RGNLKELLLA CARAVEEKNM YAVDVMVPEL RKMVSVSGTP LERLGAYMVE GLVARLASSG  240
HSIYKALRCK EPKSSDLLSY MHFLYEACPY FKFGYMSANG AIAEAVKGED RIHIIDFHIA  300
QGAQWISLLQ ALAARPGGPP TVRITGLDDS VSAYARGGGL DLVGRRLSHI AGLCKVPFEF  360
HSVAMAGEEV EEGHLGVIPG EALAVNFTLE LHHIPDETVS TANHRDRILR LVKSLRPKVL  420
TLVEQESNTN TAPFPQRFAE TLEYYTAIFE SIDLTLPRDD KERVNMEQHC LAREVVNLIA  480
CEGAERVERH EVFGKWKARL TMAGFRPSPL SSLVNATIST LLQSYSENYK LAERDGALYL  540
GWKNKPLVVS SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein