PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG029070.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 318aa MW: 35565.3 Da PI: 7.406

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG029070.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.5e-06	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TRIDC2BG029070.4 48 FVCEVCGKGFQRDQNLQLHRRGH 70 89*******************88 PP
2	zf-C2H2	17	1.6e-05	127	148	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp Cgk++ + +Lk H +t+ TRIDC2BG029070.4 127 ACPRCGKRYAVQADLKAHAKTC 148 6******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
PNPTEPEQPE AAATPAPPKK KRNLPGTPDP DAEVIALSPG TLMATNRFVC EVCGKGFQRD 60 QNLQLHRRGH NLPWRLRQRG PGAAPPRRRV YVCPEPGCVH HSPARALGDL TGIKKHFCRK 120 HGEKRWACPR CGKRYAVQAD LKAHAKTCGT REYRCDCGTL FTRRDSFVTH RAFCGALVEE 180 TGRVLAVPAP PSPRPPDLEE VEENVDKDKE KEEENVDKHK EKEDEEDKGG EDENETSAVA 240 EVDEPQNVEA AMEEPQQQRI PPSPSPTPTS PTPQEQQPMV IYSKVILPKS IFICYYCNKK 300 KGIHESCFFP NLASLMII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-93	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG029070.4