PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG029070.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 752aa MW: 81124.4 Da PI: 5.0715

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG029070.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TRIDC2BG029070.7 62 FVCEVCGKGFQRDQNLQLHRRGH 84 89******************988 PP
2	zf-C2H2	15.6	4.5e-05	141	162	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp Cgk++ + +Lk H +t+ TRIDC2BG029070.7 141 ACPRCGKRYAVQADLKAHAKTC 162 6******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MPPNPTEPEQ PEAAATPAPP KKKRNLPGTP GETACFGFCG VVDPDAEVIA LSPGTLMATN 60 RFVCEVCGKG FQRDQNLQLH RRGHNLPWRL RQRGPGAAPP RRRVYVCPEP GCVHHSPARA 120 LGDLTGIKKH FCRKHGEKRW ACPRCGKRYA VQADLKAHAK TCGTREYRCD CGTLFTRRDS 180 FVTHRAFCGA LVEETGRVLA VPAPPSPRPP DLEEVEENVD KDKEKEEENV DKHKEKEDEE 240 DKGGEDENET SAVAEVDEPQ NVEAAMEEPQ QQRIPPSPSP TPTSPTPQEQ QPMVAVVPNL 300 DEPVVVVEPI VDIKQEEEDK RDEDVCFQEA DKYDGAELED SNLPDNDTPM PPCFLPSPSD 360 AIGTDGSSTS CGTVSSASNS IAPATTTSTF AGLFASATTS TTPQSRSLRD LIGVDPTFLC 420 LAIGTPSSLF PQTDASNPGT FAPPPAPHIS ATALLQKAAE AGASQAGTSF LKEFGLASSS 480 SSTPSRPPQG RFIESSSMQS QQPQGRFIDS STQFRLPQDR YINNSMPSKL SQGRFMDTSL 540 PSQQLLPQGR FFDNSPASNL SQGRFFDNSQ PSNPPQGRFF INSPSSNLPH GRFTDYSSPG 600 RLPQGMYIDG LPQSRLPQGR YMDNSPPAKL PPQGGRFVDS NQQQWHQRSN NHNQLMDMEP 660 GPMVSGSLGL GLAYEGSNPR LPDLMMGQSP LLGPKPATLD FLGLGIGGTM GGSTASGGLP 720 ALMVGGELDM GSAAQPPSPW EEAQRKTNGR TI

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MPPNPTEPEQ PEAAATPAPP KKKRNLPGTP GETACFGFCG VVDPDAEVIA LSPGTLMATN  60
RFVCEVCGKG FQRDQNLQLH RRGHNLPWRL RQRGPGAAPP RRRVYVCPEP GCVHHSPARA  120
LGDLTGIKKH FCRKHGEKRW ACPRCGKRYA VQADLKAHAK TCGTREYRCD CGTLFTRRDS  180
FVTHRAFCGA LVEETGRVLA VPAPPSPRPP DLEEVEENVD KDKEKEEENV DKHKEKEDEE  240
DKGGEDENET SAVAEVDEPQ NVEAAMEEPQ QQRIPPSPSP TPTSPTPQEQ QPMVAVVPNL  300
DEPVVVVEPI VDIKQEEEDK RDEDVCFQEA DKYDGAELED SNLPDNDTPM PPCFLPSPSD  360
AIGTDGSSTS CGTVSSASNS IAPATTTSTF AGLFASATTS TTPQSRSLRD LIGVDPTFLC  420
LAIGTPSSLF PQTDASNPGT FAPPPAPHIS ATALLQKAAE AGASQAGTSF LKEFGLASSS  480
SSTPSRPPQG RFIESSSMQS QQPQGRFIDS STQFRLPQDR YINNSMPSKL SQGRFMDTSL  540
PSQQLLPQGR FFDNSPASNL SQGRFFDNSQ PSNPPQGRFF INSPSSNLPH GRFTDYSSPG  600
RLPQGMYIDG LPQSRLPQGR YMDNSPPAKL PPQGGRFVDS NQQQWHQRSN NHNQLMDMEP  660
GPMVSGSLGL GLAYEGSNPR LPDLMMGQSP LLGPKPATLD FLGLGIGGTM GGSTASGGLP  720
ALMVGGELDM GSAAQPPSPW EEAQRKTNGR TI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-88	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG029070.7