PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG030490.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 399aa    MW: 42985.1 Da    PI: 8.1238
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG030490.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.51.2e-53311591128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l
  TRIDC2BG030490.3  31 LPPGFRFHPTDEELVVHYLKKKAAKVPLPV-TIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 122
                       79****************************.89***************988899*************************************** PP

               NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++  ++e+vg+kk Lvfy+g+ pkg kt+W+mheyrl
  TRIDC2BG030490.3 123 ASgcGREKVGVKKALVFYRGKPPKGLKTNWIMHEYRL 159
                       *9999999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MRSMGSSDSS SGSAPPRHQP PPPQQGSAPE LPPGFRFHPT DEELVVHYLK KKAAKVPLPV  60
TIIAEVDLYK FDPWELPEKA TFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP  120
ILASGCGREK VGVKKALVFY RGKPPKGLKT NWIMHEYRLT DASSSATTSR PPPVTGGSRS  180
ASLRLDDWVL CRIYKKINKA AAGDQQRSME CEDSVEDAVT AYPLYATAGM TGAGAHGSNY  240
DSLLHHQDSH EDNFLDGLLT AEDAGLSAGP TSLSHLAAAA RASSAPTKQF LAPSSSTPFN  300
WLDASTVGIL PQARNFPGFN RSRNVGNMSL SSTADMAVDN GGGNAINTMP PFMNHLPMQD  360
GTYHQQHVIL GAPLAPEATA AATSAFQHPV QISGVNWNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-93NAC family protein