PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG030940.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 947aa MW: 105153 Da PI: 8.5382

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG030940.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	2e-18	443	542	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d sg++W +++++ +++s++yvl+ G ++ +L++gD+v F++++ e TRIDC2BG030940.6 443 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMHLQAGDTVSFSRID-PE 533 89************************555566778***********99899999999.*******************987.67 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2BG030940.6 534 GKLVMGFRK 542 767777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence
PAPPRFPRLP KTPPRPAPPR PPHRRPRVPA MSSSGPPNPI APAHQQQQQG PPPASLQQQP 60 RICFNAHCKD PKSEGPRRRG WRLRSGDYAE LCDRCYGSFE HGTFCETFHS EVAGWRKCEA 120 CGKRLHCGCI VSVHAYALLD AGGVDCILCA RKSYAAMAPS QMWSTPTVHM SQNVADRKDS 180 YVKSWRPPTG QISSQWRQNH QLWNMSTIQA DLQQRLAYEF DRPSGSEKLP PGRTFIHAQE 240 KKSDDMHDRP TTPAGMGQII RDRYANGLGQ QTSMDPTHSS TPYQREGPNP NSLHDPSHHV 300 GESDPLSSRK GIISDGGSTV STGFKLDPHH PSILKDDAAS TLPTMGGYTI TNYPPVPGRS 360 DHLRIIPNNP QQPPTTVPLS VVQKQFYSHS VIEPNYQAQF RNGKPRMDPK ARSELLPRYW 420 PRITDKELQH LSGDSNSVIT PLFEKMLSAS DAGRIGRLVL PKKCAEAYFP PISQPEGLPL 480 KVQDASGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMHLQ AGDTVSFSRI DPEGKLVMGF 540 RKTKTQEQIF RQEEPTKPAN AAPNLPDVNV NVTAPDSSPN SSLVRPNKVN TENKDSSPVE 600 QAASKIDKGG VAQKEGSGTV RTSPGPVKRK ATSIGPKIKR FRIDNEESME LKITWEEAQE 660 LLRPPLKAPS VVIVDGHEFE EYEEPPVLGR KTYFVTDQSG ENHQWAQCED CSKWRKLPVD 720 ALLPSKWTCS DNKWDPERTT CVSPQEASME ELAELIPIKA GAAKKAKLRM DTDSIDVSDG 780 LDTLANLAIL GEGESLPSQP TTKHPRHRPG CSCIVCIQPP SGKGPKHKQT CTCNVCMTVR 840 RRFRTLMLRR EKRASEKESD ELPRKKEQGQ SSESIPQDPL PASTSPSSTP QKVSGNGDDA 900 EEAMEHTMAS SPMKNQIDLN IQPEREDEQS PKSDAVGAMR LPRENAA

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence

PAPPRFPRLP KTPPRPAPPR PPHRRPRVPA MSSSGPPNPI APAHQQQQQG PPPASLQQQP  60
RICFNAHCKD PKSEGPRRRG WRLRSGDYAE LCDRCYGSFE HGTFCETFHS EVAGWRKCEA  120
CGKRLHCGCI VSVHAYALLD AGGVDCILCA RKSYAAMAPS QMWSTPTVHM SQNVADRKDS  180
YVKSWRPPTG QISSQWRQNH QLWNMSTIQA DLQQRLAYEF DRPSGSEKLP PGRTFIHAQE  240
KKSDDMHDRP TTPAGMGQII RDRYANGLGQ QTSMDPTHSS TPYQREGPNP NSLHDPSHHV  300
GESDPLSSRK GIISDGGSTV STGFKLDPHH PSILKDDAAS TLPTMGGYTI TNYPPVPGRS  360
DHLRIIPNNP QQPPTTVPLS VVQKQFYSHS VIEPNYQAQF RNGKPRMDPK ARSELLPRYW  420
PRITDKELQH LSGDSNSVIT PLFEKMLSAS DAGRIGRLVL PKKCAEAYFP PISQPEGLPL  480
KVQDASGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMHLQ AGDTVSFSRI DPEGKLVMGF  540
RKTKTQEQIF RQEEPTKPAN AAPNLPDVNV NVTAPDSSPN SSLVRPNKVN TENKDSSPVE  600
QAASKIDKGG VAQKEGSGTV RTSPGPVKRK ATSIGPKIKR FRIDNEESME LKITWEEAQE  660
LLRPPLKAPS VVIVDGHEFE EYEEPPVLGR KTYFVTDQSG ENHQWAQCED CSKWRKLPVD  720
ALLPSKWTCS DNKWDPERTT CVSPQEASME ELAELIPIKA GAAKKAKLRM DTDSIDVSDG  780
LDTLANLAIL GEGESLPSQP TTKHPRHRPG CSCIVCIQPP SGKGPKHKQT CTCNVCMTVR  840
RRFRTLMLRR EKRASEKESD ELPRKKEQGQ SSESIPQDPL PASTSPSSTP QKVSGNGDDA  900
EEAMEHTMAS SPMKNQIDLN IQPEREDEQS PKSDAVGAMR LPRENAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-142	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG030940.6