PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG032180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 570aa    MW: 64331 Da    PI: 6.4636
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG032180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.91.3e-1292015692373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       +elL++cAea+s++ +e+  +l+++ + ++s +g+p+qRl ay++e+L ar  +s++++y+al+++e +   s+e l+++k++++++P++kf+
  TRIDC2BG032180.1 201 KELLTKCAEALSEDRTEEFLKLVQEARGTVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPE---SKELLSYMKILYNICPYFKFG 290
                       689*****************************************************************9...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN aI ea+ +e+ +HiiDf+i qG+QW++L+qaLa+Rp+gpp++RiTg+++p s+  + e le +g+ L+++ +e+++p+ef++l    
  TRIDC2BG032180.1 291 YMAANGAIAEALRSEDNIHIIDFQIAQGTQWITLIQALAARPGGPPHVRITGIDDPVSEyaRGEGLEIVGNMLTSMSKEFNIPLEFTPL-PVY 382
                       ********************************************************999999**************************6.777 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                        ++++ e+L+++pgEa+aVn+ lqlh+++desv+++++rd +L++vk+lsPkv ++veqe+ +n+++Fl rfle+++yysa+f+s++a+lpr+
  TRIDC2BG032180.1 383 ATQVTKEMLKIRPGEAVAVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFLETMDYYSAMFESIDANLPRD 475
                       88999**************************************************************************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s+eri+vE+++l+++ivn++aceg++r+erhe l+kW++rl++aGFkp+pls+++++ +k ll+ ++ d y++ee++g+++lgWk+r+L+s+S
  TRIDC2BG032180.1 476 SKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLSMAGFKPYPLSSYVNSVIKKLLACYS-DKYTLEEKDGAMLLGWKSRKLISAS 567
                       ****************************************************************999.55*********************** PP

              GRAS 372 aW 373
                       aW
  TRIDC2BG032180.1 568 AW 569
                       ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MDLHQLFKYR LTGANVFCEI PTENNLANSS WQTSPLKLEF SNSPYTPLST QLECDNLSAL  60
SNTPDNQSST ETISAQPISP LEADSSYIKA GSIRENIQVR PDPLYATSRH NMQQTLRDIE  120
NVLMAPDADD ATTSTKHEFE DTKPAQLMRQ RSRTWSHESR QPLPGVVRPH FASGGYPTAS  180
YEFRPEKRQR ELRDDRQHIV KELLTKCAEA LSEDRTEEFL KLVQEARGTV SINGEPIQRL  240
GAYLLEGLVA RHGNSGTNIY RALKCREPES KELLSYMKIL YNICPYFKFG YMAANGAIAE  300
ALRSEDNIHI IDFQIAQGTQ WITLIQALAA RPGGPPHVRI TGIDDPVSEY ARGEGLEIVG  360
NMLTSMSKEF NIPLEFTPLP VYATQVTKEM LKIRPGEAVA VNFTLQLHHT PDESVDVNNP  420
RDGLLRMVKG LSPKVTTLVE QESHTNTTPF LMRFLETMDY YSAMFESIDA NLPRDSKERI  480
SVEQHCLAKD IVNIIACEGK DRVERHELLG KWKSRLSMAG FKPYPLSSYV NSVIKKLLAC  540
YSDKYTLEEK DGAMLLGWKS RKLISASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein