PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG034360.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 242aa    MW: 26705.3 Da    PI: 9.9577
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG034360.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.6e-171360148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+l+++++ +G  +W+++++  g+ R++k+c++rw +yl
  TRIDC2BG034360.2 13 RGLWSPEEDERLLRYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYL 60
                      788*******************************************97 PP
2Myb_DNA-binding50.93.7e-1666109146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg ++++E+  ++d+++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC2BG034360.2  66 RGTFSEQEERTILDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGHQCCSKQK VKRGLWSPEE DERLLRYITA HGHSCWSAVP KNAGLQRCGK SCRLRWINYL  60
RPDLKRGTFS EQEERTILDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL  120
DPKTHNLLPA SKHLLHAHGG TGSGSNPSNN PAARAQFHSP NGNGNGCATP PFTISSPTKA  180
VYDAATVASP VVAPGLYDVH NPGMMMGQHE RCQQAAIAMQ QGYPYVHNNG GGLLMNFRDQ  240
NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.15e-84MYB family protein