PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035110.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 171aa    MW: 20290.2 Da    PI: 9.532
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035110.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1170.82e-53451594117
              CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                       e  +rw +++ei+a+L+n+e++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e+np+f 
  TRIDC2BG035110.4  45 EaASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGAIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFF 137
                       4589***************************************************************************************** PP

              CG-1  96 rrcywlLeeelekivlvhylev 117
                       rrcywlL++e e+ivlvhy+++
  TRIDC2BG035110.4 138 RRCYWLLDKEAERIVLVHYRQT 159
                       *******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
NVSPPTTGFF FIRKRKNYWC FCSWDLVECS VCVVTDLNFE KLKAEAASRW FRPNEIYAVL  60
ANHERFKVHA QPIDKPVSGA IVLYDRKVVR NFRKDGHNWK KKKDGKTVQE AHEKLKIGNE  120
ERVHVYYARG EDNPNFFRRC YWLLDKEAER IVLVHYRQTS EVHHVIYGSD A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11343RKRKNYWCFCSWDLVECSVCVVTDLNFEKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.17e-58CAMTA family protein