PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 901aa    MW: 99213.1 Da    PI: 7.2243
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21126227190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgkw 76 
                       +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + +
  TRIDC2BG035380.1 126 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANAF 213
                       6*****************99997666.****************999955550....24455556666668899*************99899** PP

              FAR1  77 evtkleleHnHela 90 
                       +vt+++ eHnH+la
  TRIDC2BG035380.1 214 RVTEFVAEHNHPLA 227
                       ************97 PP
2FAR169.86.3e-22275374290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k+
  TRIDC2BG035380.1 275 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 365
                       9*************9976655..9******************9999******99999977777778899************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2BG035380.1 366 IAEHNHPLA 374
                       *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 901 aa     Download sequence    
QDQCSCDGAN QSLHHTHLPT AAASTANPSN LFFLLPLLPP SFLQTLAQTL MSTTAHPPAS  60
LSGDSSPTTS GSSSPSSSAF VAGSDEPALL GPATSTSTPS AAGDDAAVPS SPQMGMYFET  120
EDDAYEFYKV YAARLGFVVR KSNKSKNSRH TVTRRLFVCS KQGFRQEPKK PQDETNATDV  180
TVAAPPPPPR CPDSRTGCLA SLTIKLLPSA NAFRVTEFVA EHNHPLASAV SAVSLAMIPS  240
SSSHHTIAAA ASLPDPRDGP LPEMHFETED DAYAFYNRYA EHVGFSVRRS YKKRKHGVIV  300
SRIFVCSREG VSDRAKHDGL ASISTNAGGG APGTPRPGPP PTRTGCQARM VIKITPCRTY  360
RVAKFIAEHN HPLANSETVH KLRSHKMRAR GHELGAGELH RRKQGKGVQL GDAGAALEYL  420
EGLQVGNPSL YYAVGMAPDG NSAVNFFWAD AKSIIDFRSF GDVVCFDTTY GLNVYGRPFA  480
LFVGVDNHKQ LLVFGAALLY DDGIQSLKWV FQAFADAMRD RQPKTILIDE RSECAIAAAE  540
VWPGSNHCTS VWHIYHSSKR HLKQVFESSK SFGNALSQCL FDCEDEMEFL SAWEKLIEKH  600
DIGESEWLSR LFLEKEKWAL PYRRTVFSAD ILSTLRKDSM INELKRELSE QEDILLFFKR  660
YETMLEEHRS KKLQADVDGN QVTLPIPSLR MLKQSSNAYT PEAFKMFQGE FEAYMNCMSF  720
PCSAVGTVSE YKITLDEKPS EGIVKFDALD GLATCSCRKF ESVGIQCCHV LKVLDLKNIK  780
ELPEQYILKR WRKDARSVRM GEEPNCGSSS IMRSSLDVRF SNMCRMVSLI ASRAAKSEEA  840
MSYIESQSSV LLKHLDEILQ TGYPENGNHD VASSSQAISF VGNHPDHTTQ ARAVAHTANG  900
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-83FAR1 family protein