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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2BG035380.2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 918aa MW: 100874 Da PI: 7.4962 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 67.7 | 3e-21 | 118 | 219 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgkw 76
+fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk + + + +rtgC a+l++k+ + +
TRIDC2BG035380.2 118 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANAF 205
6*****************99997666.****************999955550....24455556666668899*************99899** PP
FAR1 77 evtkleleHnHela 90
+vt+++ eHnH+la
TRIDC2BG035380.2 206 RVTEFVAEHNHPLA 219
************97 PP
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| 2 | FAR1 | 69.8 | 6.5e-22 | 267 | 366 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81
fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ + r + trtgC+a++++k + +++v+k+
TRIDC2BG035380.2 267 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 357
9*************9976655..9******************9999******99999977777778899************************ PP
FAR1 82 eleHnHela 90
eHnH+la
TRIDC2BG035380.2 358 IAEHNHPLA 366
*******97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 918 aa Download sequence |
ANQSLHHTHL PTAAASTANP SNLFFLLPLL PPSFLQTLAQ TLMSTTAHPP ASLSGDSSPT 60 TSGSSSPSSS AFVAGSDEPA LLGPATSTST PSAAGDDAAV PSSPQMGMYF ETEDDAYEFY 120 KVYAARLGFV VRKSNKSKNS RHTVTRRLFV CSKQGFRQEP KKPQDETNAT DVTVAAPPPP 180 PRCPDSRTGC LASLTIKLLP SANAFRVTEF VAEHNHPLAS AVSAVSLAMI PSSSSHHTIA 240 AAASLPDPRD GPLPEMHFET EDDAYAFYNR YAEHVGFSVR RSYKKRKHGV IVSRIFVCSR 300 EGVSDRAKHD GLASISTNAG GGAPGTPRPG PPPTRTGCQA RMVIKITPCR TYRVAKFIAE 360 HNHPLANSET VHKLRSHKMR ARGHELGAGE LHRRKQGKGV QLGDAGAALE YLEGLQVGNP 420 SLYYAVGMAP DGNSAVNFFW ADAKSIIDFR SFGDVVCFDT TYGLNVYGRP FALFVGVDNH 480 KQLLVFGAAL LYDDGIQSLK WVFQAFADAM RDRQPKTILI DERSECAIAA AEVWPGSNHC 540 TSVWHIYHSS KRHLKQVFES SKSFGNALSQ CLFDCEDEME FLSAWEKLIE KHDIGESEWL 600 SRLFLEKEKW ALPYRRTVFS ADILSTLRKD SMINELKREL SEQEDILLFF KRYETMLEEH 660 RSKKLQADVD GNQVTLPIPS LRMLKQSSNA YTPEAFKMFQ GEFEAYMNCM SFPCSAVGTV 720 SEYKITLDEK PSEGIVKFDA LDGLATCSCR KFESVGIQCC HVLKVLDLKN IKELPEQYIL 780 KRWRKDARSV RMGEEPNCGS SSIMRSSLDV RFSNMCRMVS LIASRAAKSE EAMSYIESQS 840 SVLLKHLDEI LQTGYPENGN HDVASSSQAI SFVGNHPDHT TQARAVAHTA NGLTSLLGIS 900 AYPESSGQLK GSVGSLYC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38180.1 | 2e-83 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2BG035380.2 |




