PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 918aa    MW: 100874 Da    PI: 7.4962
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21118219190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgkw 76 
                       +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + +
  TRIDC2BG035380.2 118 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANAF 205
                       6*****************99997666.****************999955550....24455556666668899*************99899** PP

              FAR1  77 evtkleleHnHela 90 
                       +vt+++ eHnH+la
  TRIDC2BG035380.2 206 RVTEFVAEHNHPLA 219
                       ************97 PP

2FAR169.86.5e-22267366290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k+
  TRIDC2BG035380.2 267 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 357
                       9*************9976655..9******************9999******99999977777778899************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2BG035380.2 358 IAEHNHPLA 366
                       *******97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 918 aa     Download sequence    
ANQSLHHTHL PTAAASTANP SNLFFLLPLL PPSFLQTLAQ TLMSTTAHPP ASLSGDSSPT  60
TSGSSSPSSS AFVAGSDEPA LLGPATSTST PSAAGDDAAV PSSPQMGMYF ETEDDAYEFY  120
KVYAARLGFV VRKSNKSKNS RHTVTRRLFV CSKQGFRQEP KKPQDETNAT DVTVAAPPPP  180
PRCPDSRTGC LASLTIKLLP SANAFRVTEF VAEHNHPLAS AVSAVSLAMI PSSSSHHTIA  240
AAASLPDPRD GPLPEMHFET EDDAYAFYNR YAEHVGFSVR RSYKKRKHGV IVSRIFVCSR  300
EGVSDRAKHD GLASISTNAG GGAPGTPRPG PPPTRTGCQA RMVIKITPCR TYRVAKFIAE  360
HNHPLANSET VHKLRSHKMR ARGHELGAGE LHRRKQGKGV QLGDAGAALE YLEGLQVGNP  420
SLYYAVGMAP DGNSAVNFFW ADAKSIIDFR SFGDVVCFDT TYGLNVYGRP FALFVGVDNH  480
KQLLVFGAAL LYDDGIQSLK WVFQAFADAM RDRQPKTILI DERSECAIAA AEVWPGSNHC  540
TSVWHIYHSS KRHLKQVFES SKSFGNALSQ CLFDCEDEME FLSAWEKLIE KHDIGESEWL  600
SRLFLEKEKW ALPYRRTVFS ADILSTLRKD SMINELKREL SEQEDILLFF KRYETMLEEH  660
RSKKLQADVD GNQVTLPIPS LRMLKQSSNA YTPEAFKMFQ GEFEAYMNCM SFPCSAVGTV  720
SEYKITLDEK PSEGIVKFDA LDGLATCSCR KFESVGIQCC HVLKVLDLKN IKELPEQYIL  780
KRWRKDARSV RMGEEPNCGS SSIMRSSLDV RFSNMCRMVS LIASRAAKSE EAMSYIESQS  840
SVLLKHLDEI LQTGYPENGN HDVASSSQAI SFVGNHPDHT TQARAVAHTA NGLTSLLGIS  900
AYPESSGQLK GSVGSLYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-83FAR1 family protein