PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.23
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 821aa    MW: 91318.7 Da    PI: 7.9625
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.23genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.92.6e-2121122190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.23  21 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 107
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.23 108 FRVTEFVAEHNHPLA 122
                        *************97 PP
2FAR1705.5e-22170269290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.23 170 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 259
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.23 260 FIAEHNHPLA 269
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
AAVPSSPQMG MYFETEDDAY EFYKVYAARL GFVVRKSNKS KNSRHTVTRR LFVCSKQGFR  60
QEPKKPQDET NATDVTVAAP PPPPRCPDSR TGCLASLTIK LLPSANAFRV TEFVAEHNHP  120
LASAVSAVSL AMIPSSSSHH TIAAAASLPD PRDGPLPEMH FETEDDAYAF YNRYAEHVGF  180
SVRRSYKKRK HGVIVSRIFV CSREGVSDRA KHDGLASIST NAGGGAPGTP RPGPPPTRTG  240
CQARMVIKIT PCRTYRVAKF IAEHNHPLAN SETVHKLRSH KMRARGHELG AGELHRRKQG  300
KGVQLGDAGA ALEYLEGLQV GNPSLYYAVG MAPDGNSAVN FFWADAKSII DFRSFGDVVC  360
FDTTYGLNVY GRPFALFVGV DNHKQLLVFG AALLYDDGIQ SLKWVFQAFA DAMRDRQPKT  420
ILIDERSECA IAAAEVWPGS NHCTSVWHIY HSSKRHLKQV FESSKSFGNA LSQCLFDCED  480
EMEFLSAWEK LIEKHDIGES EWLSRLFLEK EKWALPYRRT VFSADILSTL RKDSMINELK  540
RELSEQEDIL LFFKRYETML EEHRSKKLQA DVDGNQVTLP IPSLRMLKQS SNAYTPEAFK  600
MFQGEFEAYM NCMSFPCSAV GTVSEYKITL DEKPSEGIVK FDALDGLATC SCRKFESVGI  660
QCCHVLKVLD LKNIKELPEQ YILKRWRKDA RSVRMGEEPN CGSSSIMRSS LDVRFSNMCR  720
MVSLIASRAA KSEEAMSYIE SQSSVLLKHL DEILQTGYPE NGNHDVASSS QAISFVGNHP  780
DHTTQARAVA HTANGLTSLL GISAYPESSG QLKGSVGSLY C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-84FAR1 family protein