PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG038180.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 439aa MW: 47405.6 Da PI: 9.9981

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG038180.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.2	1.7e-39	74	212	3	131
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec...eaesssssas.nss 86 g+kdrhsk++T++g RdRRvRls+ +a++f+dLqd+LG+d++sk++eWL+++a +ai++l+++ ++ +as++ +++ss a+ +s TRIDC2BG038180.2 74 GGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGYDQPSKAVEWLIKAAAAAIDKLPELdaaafPNHPASASasaNKQSSALHAEaDDS 166 78***********************************************************888883333333332333333333331344 PP TCP 87 sgkaaksaakskksqksaasalnlak.esrakarararertrekmr 131 ++++ + + +s+ s++s+ s+l+l++ +sr kar+rar+r+++ + TRIDC2BG038180.2 167 QPQQLTRSGCSSTSETSKGSVLSLSRsDSRVKARERARDRSASVKD 212 448888888****************************9887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
ERHWRRLAGG PIHTRMELSV AAAAVELGKR GRPDDQYQEQ DQDHGDAKRL ALVPWPPHQQ 60 HPSSRIYRVS RGSGGKDRHS KVYTAKGIRD RRVRLSVATA IQFYDLQDRL GYDQPSKAVE 120 WLIKAAAAAI DKLPELDAAA FPNHPASASA SANKQSSALH AEADDSQPQQ LTRSGCSSTS 180 ETSKGSVLSL SRSDSRVKAR ERARDRSASV KDKDDSVTAA VHRRPPSAQA ASFTELLTGL 240 AAATPAVAQH KQHNSWQQMT ASATADYLGF AQPRKSGHGM LHTFASPAPH LGNIAPVAMA 300 PAQHFSLSAG GGDSQTEMPH FSFSQDHYMP VHAAPASGPA VDYSLNFSMS SGLVGVNNTR 360 GTLQSNSQPH LSGHHHHHQQ QQQLQRLSTP LDAPHIPFLF SPAVAVASPT TAESHFGAAA 420 ALQLWEGFRH SDMKEKGKN

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

ERHWRRLAGG PIHTRMELSV AAAAVELGKR GRPDDQYQEQ DQDHGDAKRL ALVPWPPHQQ  60
HPSSRIYRVS RGSGGKDRHS KVYTAKGIRD RRVRLSVATA IQFYDLQDRL GYDQPSKAVE  120
WLIKAAAAAI DKLPELDAAA FPNHPASASA SANKQSSALH AEADDSQPQQ LTRSGCSSTS  180
ETSKGSVLSL SRSDSRVKAR ERARDRSASV KDKDDSVTAA VHRRPPSAQA ASFTELLTGL  240
AAATPAVAQH KQHNSWQQMT ASATADYLGF AQPRKSGHGM LHTFASPAPH LGNIAPVAMA  300
PAQHFSLSAG GGDSQTEMPH FSFSQDHYMP VHAAPASGPA VDYSLNFSMS SGLVGVNNTR  360
GTLQSNSQPH LSGHHHHHQQ QQQLQRLSTP LDAPHIPFLF SPAVAVASPT TAESHFGAAA  420
ALQLWEGFRH SDMKEKGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	4e-39	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG038180.2