PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG038350.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 43aa MW: 4799.53 Da PI: 7.442

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG038350.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	54.1	6.6e-17	3	41	24	62
YABBY 24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaesh 62 v+vP+++++++vtvrCGhCt++ls++l ++q+++a++h TRIDC2BG038350.2 3 VNVPNNCSYNIVTVRCGHCTMVLSMDLGPFHQARTAQEH 41 9***********************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 43 aa Download sequence
MPVNVPNNCS YNIVTVRCGH CTMVLSMDLG PFHQARTAQE HQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-06	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG038350.2