PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG039540.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 253aa    MW: 27784.4 Da    PI: 6.8688
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG039540.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.16.7e-1863109455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2BG039540.15  63 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 109
                        6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
APALLPSPEE EPGSSSAGGQ ALLSKRGRDE LGSRREDADD CEAVNETRPQ RPAAKRRTRA  60
AEVHNQSERK RRDRINEKMK ALQELVPHCN KSDKASILDE AIEYLKSLQL QVQIMWMTTG  120
MAPMMYPGAH QLMPPMAMGL NSACMPATQS LSQLQRIAPF MNHHLPNQMP RVQSPAIDSL  180
NVGNQMQNNG VCGEPRNPFL HPDDTLTAAS QLPDMFPYAS QKAQQNQNHQ LLPNTDMPAS  240
GPCPPSFADG TGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15572KRRTRAAEVHNQSERKRR
26873ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.17e-34bHLH family protein