PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG039540.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 219aa    MW: 24381.7 Da    PI: 7.1644
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG039540.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.45.2e-182975455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2BG039540.5 29 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 75
                      6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
REDADDCEAV NETRPQRPAA KRRTRAAEVH NQSERKRRDR INEKMKALQE LVPHCNKSDK  60
ASILDEAIEY LKSLQLQVQI MWMTTGMAPM MYPGAHQLMP PMAMGLNSAC MPATQSLSQL  120
QRIAPFMNHH LPNQMPRVQS PAIDSLNVGN QMQNNGVCGE PRNPFLHPDD TLTAASQLPD  180
MFPYASQKAQ QNQNHQLLPN TDMPASGPCP PSFADGTGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12138KRRTRAAEVHNQSERKRR
23439ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.13e-34bHLH family protein